Authorssort descendingYearTitle
An, B, Zhang, L, Browne, S, Liu, N, Ruan, L, Song, S2009Phylogeography of Tibetan snowcock (Tetraogallus tibetanus) in Qinghai–Tibetan Plateau
AGNARSSON, INGI, Kuntner, M, May-Collado, LJ2010Dogs, cats, and kin: A molecular species-level phylogeny of Carnivora
Alfaro, ME, Karns, DR, Voris, HK, Brock, CD, STUART, BRYANL2008Phylogeny, evolutionary history, and biogeography of Oriental–Australian rear-fanged water snakes (Colubroidea: Homalopsidae) inferred from mitochondrial and nuclear DNA sequences
Aliabadian, M, Kaboli, M, FÖRSCHLER, MARCI, Nijman, V, Chamani, A, Tillier, A, Prodon, R, Pasquet, E, ERICSON, PERGP, Zuccon, D2012Convergent evolution of morphological and ecological traits in the open-habitat chat complex (Aves, Muscicapidae: Saxicolinae)
Allan, GJ, Francisco-Ortega, J, SANTOS-GUERRA, ARNOLDO, Boerner, E, Zimmer, EA2004Molecular phylogenetic evidence for the geographic origin and classification of Canary Island Lotus (Fabaceae: Loteae)
ALSTRÖM, PER, ERICSON, PERGP, OLSSON, URBAN, SUNDBERG, PER2006Phylogeny and classification of the avian superfamily Sylvioidea
Ari, E, Ittzés, P, Podani, J, Le Thi, QChi, Jakó, É2012Comparison of Boolean analysis and standard phylogenetic methods using artificially evolved and natural mt-tRNA sequences from great apes
Aschliman, NC, NISHIDA, MUTSUMI, MIYA, MASAKI, INOUE, JUNG, Rosana, KM, Naylor, GJP2012Body plan convergence in the evolution of skates and rays (Chondrichthyes: Batoidea)
Aubert, J, Legal, L, DESCIMON, HENRI, Michel, F1999Molecular Phylogeny of Swallowtail Butterflies of the Tribe Papilionini (Papilionidae, Lepidoptera)
AVISE, JOHNC, Nelson, WS, Sibley, CG1994Why One-Kilobase Sequences from Mitochondrial DNA Fail to Solve the Hoatzin Phylogenetic Enigma
Baker, AJ, Yatsenko, Y, Tavares, ESendra2012Eight independent nuclear genes support monophyly of the plovers: The role of mutational variance in gene trees
Baker, AJ, Yatsenko, Y, Tavares, ESendra2012Eight independent nuclear genes support monophyly of the plovers: The role of mutational variance in gene trees
Bao, X-kang, Liu, N-F, Qu, J-yong, WANG, X-L, An, B, Wen, L-ying, Song, S2010The phylogenetic position and speciation dynamics of the genus Perdix (Phasianidae, Galliformes)
BARBER, JANETC, Francisco-Ortega, J, SANTOS-GUERRA, ARNOLDO, Turner, KG, JANSEN, ROBERTK2002Origin of Macaronesian Sideritis L. (Lamioideae: Lamiaceae) inferred from nuclear and chloroplast sequence datasets
F. Barker, K2004Monophyly and relationships of wrens (Aves: Troglodytidae): a congruence analysis of heterogeneous mitochondrial and nuclear DNA sequence data
BAROME, PIERRE-OLIVIER, LYMBERAKIS, PETROS, MONNEROT, MONIQUE, GAUTUN, JEAN-CLAUDE2001Cytochrome b Sequences Reveal Acomys minous (Rodentia, Muridae) Paraphyly and Answer the Question about the Ancestral Karyotype of Acomys dimidiatus
Barrowclough, GF, Groth, JG, Mertz, LA2006The RAG-1 exon in the avian order Caprimulgiformes: Phylogeny, heterozygosity, and base composition
Benz, BW, Robbins, MB2011Molecular phylogenetics, vocalizations, and species limits in Celeus woodpeckers (Aves: Picidae)
Benz, BW, Robbins, MB, A. Peterson, T2006Evolutionary history of woodpeckers and allies (Aves: Picidae): Placing key taxa on the phylogenetic tree
Biggs, JS, Watkins, M, PUILLANDRE, NICOLAS, Ownby, J-P, Lopez-Vera, E, Christensen, S, Moreno, KJuarez, Bernaldez, J, Licea-Navarro, A, Corneli, PShowers, Olivera, BM2010Evolution of Conus peptide toxins: Analysis of Conus californicus Reeve, 1844
Bleiweiss, R, Kirsch, JAW, Lapointe, F-J1994DNA–DNA Hybridization-Based Phylogeny for "Higher" Nonpasserines: Reevaluating a Key Portion of the Avian Family Tree
Bloomer, P, Crowe, TM1998Francolin Phylogenetics: Molecular, Morphobehavioral, and Combined Evidence
Bohlen, J, Šlechtová, V, Tan, HHui, BRITZ, RALF2011Phylogeny of the Southeast Asian freshwater fish genus Pangio (Cypriniformes; Cobitidae)
BOLLMER, JENNIFERL, KIMBALL, REBECCAT, Whiteman, NKerness, SARASOLA, JOSÉHERNÁN, Parker, PG2006Phylogeography of the Galápagos hawk (Buteo galapagoensis): A recent arrival to the Galápagos Islands
Bonaccorso, E2009Historical biogeography and speciation in the Neotropical highlands: Molecular phylogenetics of the jay genus Cyanolyca
Bonaccorso, E, A. Peterson, T2007A multilocus phylogeny of New World jay genera
Bonaccorso, E, A. Peterson, T, NAVARRO-SIGÜENZA, ADOLFOG, Fleischer, RC2010Molecular systematics and evolution of the Cyanocorax jays
Bowie, RCK, Fjeldså, J, Hackett, SJ, Crowe, TM2004Molecular evolution in space and through time: mtDNA phylogeography of the Olive Sunbird (Nectarinia olivacea/obscura) throughout continental Africa
Brambilla, M, Vitulano, S, Spina, F, Baccetti, N, Gargallo, G, Fabbri, E, Guidali, F, RANDI, ETTORE2008A molecular phylogeny of the Sylvia cantillans complex: Cryptic species within the Mediterranean basin
Braun, MJ, HUDDLESTON, CHRISTOPHERJ2009A molecular phylogenetic survey of caprimulgiform nightbirds illustrates the utility of non-coding sequences
Braun, MJ, HUDDLESTON, CHRISTOPHERJ2009A molecular phylogenetic survey of caprimulgiform nightbirds illustrates the utility of non-coding sequences
Bridge, ES, Jones, AW, Baker, AJ2005A phylogenetic framework for the terns (Sternini) inferred from mtDNA sequences: implications for taxonomy and plumage evolution
Brown, SDJ, Armstrong, KF, Cruickshank, RH2012Molecular phylogenetics of a South Pacific sap beetle species complex (Carpophilus spp., Coleoptera: Nitidulidae)
BURNS, KEVINJ, Barhoum, DN2006Population-level history of the wrentit (Chamaea fasciata): Implications for comparative phylogeography in the California Floristic Province
Cadena, CDaniel, Gutiérrez-Pinto, N, Dávila, N, R. Chesser, T2011No population genetic structure in a widespread aquatic songbird from the Neotropics
Cao, M, Jin, Y, Liu, N, Ji, W2012Effects of the Qinghai–Tibetan Plateau uplift and environmental changes on phylogeographic structure of the Daurian Partridge (Perdix dauuricae) in China
Carranza, S, Arnold, EN, Geniez, P, Roca, J, MATEO, JA2008Radiation, multiple dispersal and parallelism in the skinks, Chalcides and Sphenops (Squamata: Scincidae), with comments on Scincus and Scincopus and the age of the Sahara Desert
Carranza, S, Arnold, EN, MATEO, JA, Geniez, P2002Relationships and evolution of the North African geckos, Geckonia and Tarentola (Reptilia: Gekkonidae), based on mitochondrial and nuclear DNA sequences
Carranza, S, Arnold, EN, Pleguezuelos, JM2006Phylogeny, biogeography, and evolution of two Mediterranean snakes, Malpolon monspessulanus and Hemorrhois hippocrepis (Squamata, Colubridae), using mtDNA sequences
Cerasale, DJ, Dor, R, Winkler, DW, Lovette, IJ2012Phylogeny of the Tachycineta genus of New World swallows: Insights from complete mitochondrial genomes
Chacón, J, Madriñán, S, Debouck, D, Rodriguez, F, Tohme, J2008Phylogenetic patterns in the genus Manihot (Euphorbiaceae) inferred from analyses of nuclear and chloroplast DNA regions
Chan, LM, Brown, JL, Yoder, AD2011Integrating statistical genetic and geospatial methods brings new power to phylogeography
R. Chesser, T2004Molecular systematics of New World suboscine birds
Chiou, KL, Pozzi, L, Alfaro, JWLynch, Di Fiore, A2011Pleistocene diversification of living squirrel monkeys (Saimiri spp.) inferred from complete mitochondrial genome sequences
Christidis, L, IRESTEDT, MARTIN, Rowe, D, Boles, WE, Norman, JA2011Mitochondrial and nuclear DNA phylogenies reveal a complex evolutionary history in the Australasian robins (Passeriformes: Petroicidae)
Chubb, AL2004Nuclear corroboration of DNA–DNA hybridization in deep phylogenies of hummingbirds, swifts, and passerines: the phylogenetic utility of ZENK (ii)
Cibois, A, Cracraft, J2004Assessing the passerine “Tapestry”: phylogenetic relationships of the Muscicapoidea inferred from nuclear DNA sequences
Cibois, A, Pasquet, E, Schulenberg, TS1999Molecular Systematics of the Malagasy Babblers (Passeriformes: Timaliidae) and Warblers (Passeriformes: Sylviidae), Based on Cytochrome b and 16S rRNA Sequences
Clements, MD, Jr, HENRYLBART, Hurley, DL2012A different perspective on the phylogenetic relationships of the Moxostomatini (Cypriniformes: Catostomidae) based on cytochrome-b and Growth Hormone intron sequences
COLGAN, DJ, Zhang, CG, Paxton, JR2000Phylogenetic Investigations of the Stephanoberyciformes and Beryciformes, Particularly Whalefishes (Euteleostei: Cetomimidae), Based on Partial 12S rDNA and 16S rDNA Sequences


Scratchpads developed and conceived by (alphabetical): Ed Baker, Katherine Bouton Alice Heaton Dimitris Koureas, Laurence Livermore, Dave Roberts, Simon Rycroft, Ben Scott, Vince Smith