Literature

Authorssort ascendingYearTitle
Ödeen, A, Björklund, M2003Dynamics in the evolution of sexual traits: losses and gains, radiation and convergence in yellow wagtails (Motacilla flava)
Zuccon, D, Prys-Jones, R, Rasmussen, PC, ERICSON, PERGP2012The phylogenetic relationships and generic limits of finches (Fringillidae)
Zuccon, D, Cibois, A, Pasquet, E, ERICSON, PERGP2006Nuclear and mitochondrial sequence data reveal the major lineages of starlings, mynas and related taxa
ZAHER, HUSSAM, SCANFERLA, CARLOSAGUSTÍN2012The skull of the Upper Cretaceous snake Dinilysia patagonica Smith-Woodward, 1901, and its phylogenetic position revisited
YUE, J-P, Sun, H, BAUM, DA, LI, J-H, AL-SHEHBAZ, IA, REE, R2009Molecular phylogeny of Solms-laubachia (Brassicaceae) s.l., based on multiple nuclear and plastid DNA sequences, and its biogeographic implications
Yuan, Y-W, Liu, C, Marx, HE, OLMSTEAD, RICHARDG2010An empirical demonstration of using pentatricopeptide repeat (PPR) genes as plant phylogenetic tools: Phylogeny of Verbenaceae and the Verbena complex
XIE, L, Yi, T-shuang, Li, R, LI, D-Z, Wen, J2010Evolution and biogeographic diversification of the witch-hazel genus (Hamamelis L., Hamamelidaceae) in the Northern Hemisphere
WÜSTER, WOLFGANG, Peppin, L, Pook, CE, Walker, DE2008A nesting of vipers: Phylogeny and historical biogeography of the Viperidae (Squamata: Serpentes)
Westneat, MW, Alfaro, ME2005Phylogenetic relationships and evolutionary history of the reef fish family Labridae
Webb, DMatthew, Moore, WS2005A phylogenetic analysis of woodpeckers and their allies using 12S, Cyt b, and COI nucleotide sequences (class Aves; order Piciformes)
Waeschenbach, A, Webster, BL, Littlewood, DTJ2012Adding resolution to ordinal level relationships of tapeworms (Platyhelminthes: Cestoda) with large fragments of mtDNA
SÁNCHEZ-VILLAGRA, MR, WIBLE, JR2002Patterns of evolutionary transformation in the petrosal bone and some basicranial features in marsupial mammals, with special reference to didelphids
Verzi, DH2008Phylogeny and adaptive diversity of rodents of the family Ctenomyidae (Caviomorpha): delimiting lineages and genera in the fossil record
Vallejo, B2005Inferring the mode of speciation in Indo-West Pacific Conus (Gastropoda: Conidae)
TËMKIN, ILYA2006Morphological perspective on the classification and evolution of Recent Pterioidea (Mollusca: Bivalvia)
TSOLAKIS, HARALABOS, TIXIER, MARIESTEPHANE, KREITER, SERGE, RAGUSA, SALVATORE2012The concept of genus within the family Phytoseiidae (Acari: Parasitiformes): historical review and phylogenetic analyses of the genus Neoseiulus Hughes
Trontelj, P, Utevsky, SY2005Celebrity with a neglected taxonomy: molecular systematics of the medicinal leech (genus Hirudo)
Trontelj, P, Sket, B, Steinbrück, G1999Molecular phylogeny of leeches: Congruence of nuclear and mitochondrial rDNA data sets and the origin of bloodsucking
Treplin, S, TIEDEMANN, RALPH2007Specific chicken repeat 1 (CR1) retrotransposon insertion suggests phylogenetic affinity of rockfowls (genus Picathartes) to crows and ravens (Corvidae)
Tarkhnishvili, DN, THORPE, ROGERS, Arntzen, JW2000Pre-Pleistocene Refugia and Differentiation between Populations of the Caucasian Salamander (Mertensiella caucasica)
Tang, L, Zou, X-hui, Achoundong, G, Potgieter, C, Second, G, Zhang, D-Y, Ge, S2010Phylogeny and biogeography of the rice tribe (Oryzeae): Evidence from combined analysis of 20 chloroplast fragments
Sun, P, Clamp, JC, Xu, D2010Analysis of the secondary structure of ITS transcripts in peritrich ciliates (Ciliophora, Oligohymenophorea): Implications for structural evolution and phylogenetic reconstruction
Subbotin, SA, Vierstraete, A, DE LEY, PAUL, Rowe, J, Waeyenberge, L, Moens, M, Vanfleteren, JR2001Phylogenetic Relationships within the Cyst-Forming Nematodes (Nematoda, Heteroderidae) Based on Analysis of Sequences from the ITS Regions of Ribosomal DNA
SPALIK, KRZYSZTOF, Downie, SR2007Intercontinental disjunctions in Cryptotaenia (Apiaceae, Oenantheae): an appraisal using molecular data
Sole, CL, SCHOLTZ, CLARKEH, Ball, JB, MANSELL, MERVYNW2013Phylogeny and biogeography of southern African spoon-winged lacewings (Neuroptera: Nemopteridae: Nemopterinae)
SKUTSCHAS, PAVEL, MARTIN, THOMAS2011Cranial anatomy of the stem salamander Kokartus honorarius (Amphibia: Caudata) from the Middle Jurassic of Kyrgyzstan
Schilling, EE2011Hybrid genera in Liatrinae (Asteraceae: Eupatorieae)
SATO, JUNJ, Wolsan, M, Minami, S, Hosoda, T, SINAGA, MARTUAH, Hiyama, K, Yamaguchi, Y, Suzuki, H2009Deciphering and dating the red panda’s ancestry and early adaptive radiation of Musteloidea
SANDERS, KATEL, Mumpuni, HAMIDY, AMIR, HEAD, JASONJ, Gower, DJ2010Phylogeny and divergence times of filesnakes (Acrochordus): Inferences from morphology, fossils and three molecular loci
SALVI, DANIELE, Mariottini, P2012Molecular phylogenetics in 2D: ITS2 rRNA evolution and sequence-structure barcode from Veneridae to Bivalvia
de la Rúa, P, Simón, B, Cifuentes, D, Martinez-Mora, C, Cenis, JL2006New insights into the mitochondrial phylogeny of the whitefly Bemisia tabaci (Hemiptera: Aleyrodidae) in the Mediterranean BasinNuevas perspectivas en la filogenia mitocondrial de la mosca blanca, Bemisia tabaci (Hemiptera, Aleyrodida) en la Cuenca Medite
Roy, L, Dowling, APG, Chauve, CM, Buronfosse, T2009Delimiting species boundaries within Dermanyssus Dugès, 1834 (Acari:Dermanyssidae) using a total evidence approach
Rotthowe, K, STARCK, JM1998Evidence for a phylogenetic position of button quails (Turnicidae: Aves) among the Gruiformes
Ropiquet, A, Hassanin, A2005Molecular evidence for the polyphyly of the genus Hemitragus (Mammalia, Bovidae)
Riesing, MJ, Kruckenhauser, L, Gamauf, A, Haring, E2003Molecular phylogeny of the genus Buteo (Aves: Accipitridae) based on mitochondrial marker sequences
Richard, M, THORPE, ROGERS2001Can Microsatellites Be Used to Infer Phylogenies? Evidence from Population Affinities of the Western Canary Island Lizard (Gallotia galloti)
RICE, NATHANH, Martínez-Meyer, E, A. Peterson, T2003Ecological niche differentiation in the Aphelocoma jays: a phylogenetic perspective
Rees, DJ, Dioli, M, KIRKENDALL, LAWRENCER2003Molecules and morphology: evidence for cryptic hybridization in African Hyalomma (Acari: Ixodidae)
RAGSDALE, ERIKJ, NGO, PHUONGT, CRUM, JOHN, ELLISMAN, MARKH, BALDWIN, JAMESG2011Reconstruction of the pharyngeal corpus of Aphelenchus avenae (Nematoda: Tylenchomorpha), with implications for phylogenetic congruence
Qiao, T, ZHU, MIN2009A new tooth-plated lungfish from the Middle Devonian of Yunnan, China, and its phylogenetic relationships
Päckert, M, Martens, J, Wink, M, Feigl, A, Tietze, DThomas2012Molecular phylogeny of Old World swifts (Aves: Apodiformes, Apodidae, Apus and Tachymarptis) based on mitochondrial and nuclear markers
Páez-Moscoso, DJ, GUAYASAMIN, JUANM2012Species limits in the Andean toad genus Osornophryne (Bufonidae)
PRAGER, MARIA, JOHANSSON, EIANETTE, Andersson, S2008A molecular phylogeny of the African widowbirds and bishops, Euplectes spp. (Aves: Passeridae: Ploceinae)
Poulakakis, N, Lymberakis, P, TSIGENOPOULOS, CS, Magoulas, A, MYLONAS, M2005Phylogenetic relationships and evolutionary history of snake-eyed skink Ablepharus kitaibelii (Sauria: Scincidae)
Pons, JM, Hassanin, A, Crochet, PA2005Phylogenetic relationships within the Laridae (Charadriiformes: Aves) inferred from mitochondrial markers
Pitra, C, Lieckfeldt, D, Frahnert, S, Fickel, J2002Phylogenetic Relationships and Ancestral Areas of the Bustards (Gruiformes: Otididae), Inferred from Mitochondrial DNA and Nuclear Intron Sequences
Pestano, J, BROWN, RICHARDP, Suárez, NM, Baez, M2003Diversification of sympatric Sapromyza (Diptera: Lauxaniidae) from Madeira: six morphological species but only four mtDNA lineages
Perkins, EM, Donnellan, SC, Bertozzi, T, Chisholm, LA, Whittington, ID2009Looks can deceive: Molecular phylogeny of a family of flatworm ectoparasites (Monogenea: Capsalidae) does not reflect current morphological classification
Pasquet, E, Pons, J-M, Fuchs, J, Cruaud, C, Bretagnolle, V2007Evolutionary history and biogeography of the drongos (Dicruridae), a tropical Old World clade of corvoid passerines
OLSSON, URBAN, ALSTRÖM, PER, SVENSSON, LARS, Aliabadian, M, SUNDBERG, PER2010The Lanius excubitor (Aves, Passeriformes) conundrum—Taxonomic dilemma when molecular and non-molecular data tell different stories

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Scratchpads developed and conceived by (alphabetical): Ed Baker, Katherine Bouton Alice Heaton Dimitris Koureas, Laurence Livermore, Dave Roberts, Simon Rycroft, Ben Scott, Vince Smith